PROJECT(IDO) 
FIND_PACKAGE(ITK) 
IF(ITK_FOUND) 	
	INCLUDE(${ITK_USE_FILE}) 
ELSE(ITK_FOUND) 	
	MESSAGE(FATAL_ERROR "ITK not found. Please set ITK_DIR.") 
ENDIF(ITK_FOUND) 

#The following lines are required to use Dart
ENABLE_TESTING()
INCLUDE(Dart)

#Files for IDO
SET(DEFORG_SRCS 
${CMAKE_CURRENT_SOURCE_DIR}/source/organism/Organism.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/organism/itkOrganism.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/organism/Org_EulerSchedule.cxx

${CMAKE_CURRENT_SOURCE_DIR}/source/behavioral/abc/Behavior.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/behavioral/Beh_TranslateAll.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/behavioral/Beh_UniformScale.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/behavioral/Beh_SearchForObject.cxx

${CMAKE_CURRENT_SOURCE_DIR}/source/geometrical/abc/Geometric.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/geometrical/Geom_MeshSpatialObject.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/geometrical/Geom_vGeometry.cxx


${CMAKE_CURRENT_SOURCE_DIR}/source/physical/abc/Physics.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/physical/abc/Deformation.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/physical/abc/SpringMassDeformation.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/physical/Phys_Euler.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/physical/Phys_LevelSet.cxx 
${CMAKE_CURRENT_SOURCE_DIR}/source/physical/Def_Translation.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/physical/Def_UniformScale.cxx

${CMAKE_CURRENT_SOURCE_DIR}/source/sensory/abc/Sensor.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/sensory/Sense_Gradient.cxx 
${CMAKE_CURRENT_SOURCE_DIR}/source/sensory/Sense_AvgIntensity.cxx 

${CMAKE_CURRENT_SOURCE_DIR}/source/cognitive/abc/ControlCenter.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/cognitive/Ctrl_ScheduleDriven.cxx
${CMAKE_CURRENT_SOURCE_DIR}/source/cognitive/Ctrl_SensoryDriven.cxx
)

#Include files for IDO
SET(DEFORG_INCS  ${CMAKE_CURRENT_SOURCE_DIR}/source/organism/
${CMAKE_CURRENT_SOURCE_DIR}/source/geometrical/abc/
${CMAKE_CURRENT_SOURCE_DIR}/source/geometrical/
${CMAKE_CURRENT_SOURCE_DIR}/source/sensory/
${CMAKE_CURRENT_SOURCE_DIR}/source/sensory/abc/
${CMAKE_CURRENT_SOURCE_DIR}/source/physical/
${CMAKE_CURRENT_SOURCE_DIR}/source/physical/abc/
${CMAKE_CURRENT_SOURCE_DIR}/source/behavioral/
${CMAKE_CURRENT_SOURCE_DIR}/source/behavioral/abc/
${CMAKE_CURRENT_SOURCE_DIR}/source/cognitive/
${CMAKE_CURRENT_SOURCE_DIR}/source/cognitive/abc/
${CMAKE_CURRENT_SOURCE_DIR}/source/include/
 )  

SET(DEFORG_BUILD ${CMAKE_CURRENT_BINARY_DIR} )
SET(DATA_DIR ${CMAKE_CURRENT_SOURCE_DIR}/data)
#-----------------------------------------------------------------------------
# Build testing and examples
OPTION(BUILD_EXAMPLES "Build the examples" "ON")
IF(BUILD_EXAMPLES)
  SUBDIRS(examples)
ENDIF(BUILD_EXAMPLES)


ADD_LIBRARY(IDOLib ${DEFORG_SRCS}) 
INCLUDE_DIRECTORIES(${DEFORG_INCS})  
TARGET_LINK_LIBRARIES(
	IDOLib
	ITKCommon
	ITKIO
	ITKBasicFilters
	ITKNumerics
	ITKMetaIO
	itkvnl)


###DART_TESTING
SET(CurrentExe "ImageCompare")
ADD_EXECUTABLE(${CurrentExe} ImageCompare.cxx) 
TARGET_LINK_LIBRARIES(${CurrentExe} ITKCommon ITKIO)