PROJECT(defOrg_basic) 
FIND_PACKAGE(ITK) 
IF(ITK_FOUND) 	
	INCLUDE(${ITK_USE_FILE}) 
ELSE(ITK_FOUND) 	
	MESSAGE(FATAL_ERROR "ITK not found. Please set ITK_DIR.") 
ENDIF(ITK_FOUND) 

#The following lines are required to use Dart
ENABLE_TESTING()
INCLUDE(Dart)


IF(DEFORG_BUILD)
	LINK_DIRECTORIES(${DEFORG_BUILD})
ELSE(DEFORG_BUILD)
	FIND_PATH( IDO_BUILD_PATH IDO "The I-DO build directory" ) 
	LINK_DIRECTORIES(${IDO_BUILD_PATH})
ENDIF(DEFORG_BUILD)

IF(DEFORG_INCS)
ELSE (DEFORG_INCS)
	FIND_PATH( IDO_PATH IDO "The I-DO source directory" ) 

	#Include files for PBDefOrg
	SET(DEFORG_INCS 
	${IDO_PATH}/organism/
	${IDO_PATH}/geometrical/abc/
	${IDO_PATH}/geometrical/
	${IDO_PATH}/sensory/
	${IDO_PATH}/sensory/abc/
	${IDO_PATH}/physical/
	${IDO_PATH}/physical/abc/
	${IDO_PATH}/behavioral/
	${IDO_PATH}/behavioral/abc/
	${IDO_PATH}/cognitive/
	${IDO_PATH}/cognitive/abc/
	${IDO_PATH}/include/
	${IDO_PATH}/sensory/
)  
ENDIF (DEFORG_INCS)
INCLUDE_DIRECTORIES(${DEFORG_INCS})  
ADD_EXECUTABLE(defOrg_basic defOrg.cxx)  
TARGET_LINK_LIBRARIES(
	defOrg_basic
	ITKCommon
	ITKIO
	ITKBasicFilters
	ITKNumerics
	ITKMetaIO
	itkvnl
	IDOLib)
IF(DO_DATA_DIR)
ELSE(DO_DATA_DIR)
	FIND_PATH(DO_DATA_DIR DDIR "The data directory") 
ENDIF(DO_DATA_DIR)
ADD_TEST(DefOrgBasic defOrg_basic  ${DO_DATA_DIR}/cube.mhd test.mhd ${DO_DATA_DIR}/eulerSchedule3d.txt ${DO_DATA_DIR}/cubeMesh3d.meta)