#############################################
# PROJECT: GeoInterp                        #
#############################################
INCLUDE(${CMAKE_SOURCE_DIR}/IJMacros.txt)

PROJECT(GeoInterp)

#The following lines are required to use Dart
ENABLE_TESTING()
INCLUDE(Dart)

# We need ITK and VTK
SET(Required_Packages
ITK
VTK
FLTK
)

# Load all of the packages we need.
FOREACH(Package ${Required_Packages})
  LOADPACKAGE(${Package})
ENDFOREACH(Package)

# ITK Libraries to include
SET(PRJ_ITK_LIBS
ITKCommon
ITKIO
ITKBasicFilters
)

# VTK libraries to include
SET(PRJ_VTK_CORE_LIBS
vtkCommon
vtkFiltering
vtkGraphics
vtkImaging
vtkIO
)

# Can we include patented vtk libs?
IF(VTK_USE_PATENTED)
  SET(PRJ_VTK_LIBS vtkPatented ${PRJ_VTK_CORE_LIBS})
ELSE(VTK_USE_PATENTED)
  SET(PRJ_VTK_LIBS ${PRJ_VTK_CORE_LIBS})
ENDIF(VTK_USE_PATENTED)

# FLTK Related libraries
## Workaround for problem with FindFLTK.cmake when FLTK was built using Cmake.
IF(NOT FLTK_LIBRARIES)
  SET(FLTK_LIBRARIES  
	fltk
	fltk_images
	fltk_forms
	fltk_gl)
ENDIF(NOT FLTK_LIBRARIES)

# All the libraries used by us
SET(Libraries 
  ${PRJ_ITK_LIBS} 
  ${PRJ_VTK_LIBS}
  ${FLTK_LIBRARIES}
)

#############################################
# SOURCE FILE SPECIFICATION                 #
#############################################

# The part of the source code devoted to the SNAP application logic
# is organized into a separate library
SET(LOGIC_CXX
  Common/CommandLineArgumentParser.cxx
  Common/IRISException.cxx
  Common/Registry.cxx
  Common/SNAPCommon.cxx
  Common/SystemInterface.cxx
  Common/ITKExtras/itkVoxBoCUBImageIO.cxx
  Common/ITKExtras/itkVoxBoCUBImageIOFactory.cxx
  Logic/Common/ImageCoordinateGeometry.cxx
  Logic/Common/ImageCoordinateTransform.cxx
  Logic/Common/SNAPRegistryIO.cxx
  Logic/Common/ColorLabelTable.cxx
  Logic/Common/SNAPSegmentationROISettings.cxx
  Logic/Framework/GlobalState.cxx
  Logic/Framework/IRISApplication.cxx
  Logic/Framework/IRISImageData.cxx
  Logic/Framework/SNAPImageData.cxx
  Logic/ImageWrapper/GreyImageWrapper.cxx
  Logic/ImageWrapper/GuidedImageIO.cxx
  Logic/ImageWrapper/LabelImageWrapper.cxx
  Logic/ImageWrapper/LevelSetImageWrapper.cxx
  Logic/ImageWrapper/SpeedColorMap.cxx
  Logic/ImageWrapper/SpeedImageWrapper.cxx
  Logic/LevelSet/SnakeParameters.cxx
  Logic/Mesh/AllPurposeProgressAccumulator.cxx
  Logic/Mesh/IRISMeshPipeline.cxx
  Logic/Mesh/LevelSetMeshPipeline.cxx
  Logic/Mesh/MeshObject.cxx
  Logic/Mesh/MeshOptions.cxx
  Logic/Mesh/VTKMeshPipeline.cxx
  Logic/Preprocessing/EdgePreprocessingSettings.cxx
  Logic/Preprocessing/ThresholdSettings.cxx
  Logic/Slicing/IntensityCurveVTK.cxx
)

# The headers for the Logic code
SET(LOGIC_HEADERS
  Common/CommandLineArgumentParser.h
  Common/Credits.h
  Common/IRISException.h
  Common/IRISVectorTypes.h
  Common/IRISVectorTypesToITKConversion.h
  Common/IRISVectorTypes.txx
  Common/Registry.h
  Common/SNAPCommon.h
  Common/SNAPOpenGL.h
  Common/SystemInterface.h
  Common/ITKExtras/itkVoxBoCUBImageIO.h
  Common/ITKExtras/itkVoxBoCUBImageIOFactory.h
  Logic/Common/ColorLabel.h
  Logic/Common/ColorLabelTable.h
  Logic/Common/ImageCoordinateGeometry.h
  Logic/Common/ImageCoordinateTransform.h
  Logic/Common/ImageRayIntersectionFinder.h
  Logic/Common/ImageRayIntersectionFinder.txx
  Logic/Common/SNAPRegistryIO.h
  Logic/Common/SNAPSegmentationROISettings.h
  Logic/Framework/GlobalState.h
  Logic/Framework/IRISApplication.h
  Logic/Framework/IRISImageData.h
  Logic/Framework/SNAPImageData.h
  Logic/ImageWrapper/GreyImageWrapper.h
  Logic/ImageWrapper/GuidedImageIO.h
  Logic/ImageWrapper/ImageIORoutines.h
  Logic/ImageWrapper/ImageWrapper.h
  Logic/ImageWrapper/ImageWrapper.txx
  Logic/ImageWrapper/LabelImageWrapper.h
  Logic/ImageWrapper/LevelSetImageWrapper.h
  Logic/ImageWrapper/SpeedColorMap.h
  Logic/ImageWrapper/SpeedImageWrapper.h
  Logic/LevelSet/LevelSetExtensionFilter.h
  Logic/LevelSet/SnakeParameters.h
  Logic/LevelSet/SignedDistanceFilter.h
  Logic/LevelSet/SignedDistanceFilter.txx
  Logic/LevelSet/SNAPAdvectionFieldImageFilter.h
  Logic/LevelSet/SNAPAdvectionFieldImageFilter.txx
  Logic/LevelSet/SNAPLevelSetDriver.h
  Logic/LevelSet/SNAPLevelSetDriver.txx
  Logic/LevelSet/SNAPLevelSetFunction.h
  Logic/LevelSet/SNAPLevelSetFunction.txx
  Logic/LevelSet/SNAPLevelSetStopAndGoFilter.h
  Logic/LevelSet/SNAPLevelSetStopAndGoFilter.txx
  Logic/Mesh/IRISMeshPipeline.h
  Logic/Mesh/LevelSetMeshPipeline.h
  Logic/Mesh/MeshObject.h
  Logic/Mesh/MeshOptions.h
  Logic/Mesh/VTKMeshPipeline.h
  Logic/Preprocessing/EdgePreprocessingImageFilter.h
  Logic/Preprocessing/EdgePreprocessingImageFilter.txx
  Logic/Preprocessing/EdgePreprocessingSettings.h
  Logic/Preprocessing/SmoothBinaryThresholdImageFilter.h
  Logic/Preprocessing/SmoothBinaryThresholdImageFilter.txx
  Logic/Preprocessing/ThresholdSettings.h
  Logic/Slicing/IntensityCurveInterface.h
  Logic/Slicing/IntensityCurveVTK.h
  Logic/Slicing/IRISSlicer.h
  Logic/Slicing/IRISSlicer.txx
  Logic/Slicing/UnaryFunctorCache.h
  Logic/Slicing/UnaryFunctorCache.txx
)

SET(MY_SOURCE_DIR ${CMAKE_SOURCE_DIR})
# Include directories
INCLUDE_DIRECTORIES(
	${ITK_DIR}/Utilities/zlib
	${MY_SOURCE_DIR}/Common
	${MY_SOURCE_DIR}/Common/ITKExtras
	${MY_SOURCE_DIR}/Logic
	${MY_SOURCE_DIR}/Logic/Common
	${MY_SOURCE_DIR}/Logic/Framework
	${MY_SOURCE_DIR}/Logic/ImageWrapper
	${MY_SOURCE_DIR}/Logic/LevelSet
	${MY_SOURCE_DIR}/Logic/Mesh
	${MY_SOURCE_DIR}/Logic/Preprocessing
	${MY_SOURCE_DIR}/Logic/Slicing
)

# Define the Interpolation and testing executables
SET(CurrentExe "ImageCompare")
ADD_EXECUTABLE(${CurrentExe} ImageCompare.cxx) 
TARGET_LINK_LIBRARIES(${CurrentExe} ${Libraries})

# The SNAP logic library
ADD_LIBRARY(itksnaplogic ${LOGIC_CXX})
TARGET_LINK_LIBRARIES(itksnaplogic ${Libraries})

# The contour interpolation program
SET(CurrentExe "GeoInterp")
ADD_EXECUTABLE(${CurrentExe} GeoInterp.cxx) 
TARGET_LINK_LIBRARIES(${CurrentExe}
	${Libraries}
	itksnaplogic
)

# Define the tests (as specified in the submission template)
# FIXME
ADD_TEST(CreateImage GeoInterp --parameters ${CMAKE_SOURCE_DIR}/TestData/automate.txt --greyImage ${CMAKE_SOURCE_DIR}/TestData/input.pim)
ADD_TEST(CompareImage ImageCompare ${CMAKE_SOURCE_DIR}/TestData/correctResult.mhd ${CMAKE_SOURCE_DIR}/TestData/input.pim.out.mhd)